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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
UCEC cis rs9309473 1 rs6756987 chr2:73687077 ALMS1P chr2:73872046-73912692:+ 0.54 6.42 1.62E-9 Metabolite levels
UCEC cis rs6759004 1 rs6759004 chr2:202004676 PPIL3 chr2:201735680-201753999:- -0.67 -6.51 1.02E-9 Triptolide cytotoxicity
UCEC cis rs9815354 1 rs6763829 chr3:41897046 ULK4 chr3:41288091-42003660:- 0.52 6.25 3.94E-9 Diastolic blood pressure
UCEC cis rs10935120 1 rs6765505 chr3:134208132 ANAPC13 chr3:134196547-134204865:- 0.39 4.45 1.65E-5 Height
UCEC cis rs10935120 1 rs6766818 chr3:134226159 ANAPC13 chr3:134196547-134204865:- 0.4 4.63 7.74E-6 Height
UCEC cis rs9815354 1 rs6768128 chr3:41865080 ULK4 chr3:41288091-42003660:- 0.45 5.14 8.26E-7 Diastolic blood pressure
UCEC cis rs9815354 1 rs6768542 chr3:41865474 ULK4 chr3:41288091-42003660:- 0.45 5.13 8.63E-7 Diastolic blood pressure
UCEC cis rs9815354 1 rs6768563 chr3:41865541 ULK4 chr3:41288091-42003660:- 0.44 5.02 1.42E-6 Diastolic blood pressure
UCEC cis rs10935120 1 rs6769885 chr3:134286913 ANAPC13 chr3:134196547-134204865:- 0.39 4.38 2.19E-5 Height
UCEC cis rs9815354 1 rs6781326 chr3:41777028 ULK4 chr3:41288091-42003660:- 0.5 6.23 4.42E-9 Diastolic blood pressure
UCEC cis rs9815354 1 rs6783001 chr3:41862232 ULK4 chr3:41288091-42003660:- 0.54 6.51 1.02E-9 Diastolic blood pressure
UCEC cis rs10935120 1 rs6785027 chr3:134211649 ANAPC13 chr3:134196547-134204865:- -0.39 -4.43 1.78E-5 Height
UCEC cis rs10935120 1 rs6787371 chr3:134254991 ANAPC13 chr3:134196547-134204865:- 0.4 4.62 8.08E-6 Height
UCEC cis rs9815354 1 rs6790732 chr3:41864872 ULK4 chr3:41288091-42003660:- 0.54 6.51 1.02E-9 Diastolic blood pressure
UCEC cis rs9815354 1 rs6791806 chr3:41889995 ULK4 chr3:41288091-42003660:- 0.52 6.25 3.94E-9 Diastolic blood pressure